Insertion junction: CLIP2.017186_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017186
Chromosome:chromosome 17
Location:4190073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729350 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGAAGATAGGCATGCTGGACAACCGTGCCGCGTGAACCTCCTGAAAT
Internal bar code:TTCTAGTACTTAGGACTGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTCAGCACTGTGTTTG
Suggested primer 2:TGTCCAGAAGCGACAAGACC