Insertion junction: CLIP2.017190_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017190
Chromosome:chromosome 3
Location:7992172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201900 RSP1 (1 of 1) PTHR23084//PTHR23084:SF172 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED // SUBFAMILY NOT NAMED; Radial spoke protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCGGCTGCTGTGGCGCTCGTTCACGGCACCCAGTGCAACCAACCTTC
Internal bar code:ACTAGTCATCCCCTCATTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4744
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATTGTTACAGCCGCGTG
Suggested primer 2:ATCCTGCTCAGCTCCAGGTA