Insertion junction: CLIP2.017196_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017196
Chromosome:chromosome 5
Location:1522249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234660 (1 of 4) IPR011016//IPR013083 - Zinc finger, RING-CH-type // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGGGCCGCGTGGCGTTCATCCAGGACGTGCGGCGCCTGCTGCGCCTG
Internal bar code:GGAGAGAATGCATCTGTCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGTCCAGGAACATGCC
Suggested primer 2:CCGAAGCCCAAGGGAAAGAT