Insertion junction: CLIP2.017198_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017198
Chromosome:chromosome 1
Location:2543653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015050 AGK1 (1 of 1) IPR006569//IPR017956//IPR020478 - CID domain // AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGGATCGCATGCCGAGGCAGCGGTCTATCAGCGACGCCGGCACGGG
Internal bar code:ATATACAATTTTGCGTGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1854
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTCTCCCTCCATTCG
Suggested primer 2:TCCTGATGCCGCTAAAGCAA