Insertion junction: CLIP2.017206_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017206
Chromosome:chromosome 6
Location:3841147
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278179 (1 of 1) PTHR18937//PTHR18937:SF244 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATCTTGCGCAGCATGCCGTGCCGCCCGCTCTGCCACCGCGCCAGCT
Internal bar code:TCGGCCCTCTCGTGTATTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3726
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCCCTAATGCTTGCGT
Suggested primer 2:ATCGAGAAGGGGATGGGGAA