Insertion junction: CLIP2.017209_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017209
Chromosome:chromosome 3
Location:5563090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185350 BGS3,CALS1,GTR9,GTR15 Callose synthase 1; (1 of 2) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGCTGAGCGGCCAGGGCGAGGAGCAGATCGCGCAGTGGATGGCGTTC
Internal bar code:AAATGTCCATCGATTGCGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCAAGACGTCATCCA
Suggested primer 2:CTGGTGGACACGCAGATCTT