Insertion junction: CLIP2.017220_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017220
Chromosome:chromosome 3
Location:5648975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186300 DII2,FAP146,p38 p38 protein Associated with Inner Arm Dynein d; (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGAATGGCAGCTCGACCATGGGGTTGCTCGAGGTCCTTATGTGACGTG
Internal bar code:ATAATACTGGTCATTGATCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTATTCCAGGAGTCGCC
Suggested primer 2:ACTATGGATTACTGGCGCGG