Insertion junction: CLIP2.017222_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017222
Chromosome:chromosome 12
Location:3559888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCAGCTGGCGCACCGGGGGCGGTTGTCGGAGGAGGCAAGCCGGCTG
Internal bar code:TTAGAGCCGGTGGCACGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:962
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGATGTCTCATCGTCAG
Suggested primer 2:ACAGGCTGCTGTATGTGCAT