Insertion junction: CLIP2.017227_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017227
Chromosome:chromosome 16
Location:5436541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682600 (1 of 1) PTHR24079//PTHR24079:SF0 - FAMILY NOT NAMED // KNIRPS-RELATED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGCCCCGCCGTTGCTGTGCCCGCTTGCCGAAGCTGTCCTTGTGCGC
Internal bar code:ACTTCTATGTATTGGCGCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGTCAATAATCGGGCCGC
Suggested primer 2:AAGCCTCTGACACTCGTGTG