Insertion junction: CLIP2.017234_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017234
Chromosome:chromosome 17
Location:5800352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741300 SAK1 Regulator of acclimation to singlet oxygen 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGGGCGTTGTGGCCGTCCGACCTGGTCGTTGAACCTCCCTTGACCG
Internal bar code:GGTTGTTGGTGCCCATGACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTTCGCTAGCGCTCATA
Suggested primer 2:TGAAGTCGACTGCTCTGCTG