Insertion junction: CLIP2.017243_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017243
Chromosome:chromosome 6
Location:5397818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285500 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCCCAAGGAGGCTGGATTTAGGAGCACATTCTGAGCTATCTACCGTG
Internal bar code:AAGGTTCCAAATGTGCGGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2159
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGTGTTAGGGCGGGATG
Suggested primer 2:CAGCGGTGCAAAATGGTTGA