Insertion junction: CLIP2.017243_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017243
Chromosome:chromosome 6
Location:5397821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285500 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGGTGCGCCAGTCACGGCACATACATACGCACAGCTCCCAGCAAAAG
Internal bar code:AAGGTTCCAAATGTGCGGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGGTGCAAAATGGTTGA
Suggested primer 2:AATGGTGTTAGGGCGGGATG