Insertion junction: CLIP2.017247_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017247
Chromosome:chromosome 12
Location:8459648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549850 (1 of 1) PF09445 - RNA cap guanine-N2 methyltransferase (Methyltransf_15) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCTGGGGCGGCCCTGCTACTGCGGCCAGGGCCACTACAGCCTGTCGC
Internal bar code:ATATTGAACGCCTTTCCCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1716
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTCCGTGTTGTGTTGTG
Suggested primer 2:TCATCCTGTTGTGGCTACGG