Insertion junction: CLIP2.017253_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017253
Chromosome:chromosome 10
Location:3264514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442800 UAPA1,XUV6 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACTTCCAGTTCGGGGCCGGCATCCTGTCCTGCATGGGCGTGTCCTTC
Internal bar code:ACTCAATTGTATTGTAAAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3956
LEAP-Seq percent confirming:98.7952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTACTTCTTGCCCTGGT
Suggested primer 2:CTCATTGTGGCCCTGGTCAT