Insertion junction: CLIP2.017262_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017262
Chromosome:chromosome 14
Location:2823896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g626667 (1 of 1) PTHR13675//PTHR13675:SF0 - FAMILY NOT NAMED // LYR MOTIF-CONTAINING PROTEIN 2 gene_edge/mRNA_edge/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAGGGAGCAGGCTGTAGCAGTAGCAGTAGCAGGGGCAGTAGCAGCAGG
Internal bar code:GCATTCATAGAATACAATGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTACTCGTGGGACTGGT
Suggested primer 2:AGTAAGGCACTGACGTTGGG