Insertion junction: CLIP2.017272_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017272
Chromosome:chromosome 3
Location:2424618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158750 HEL14 (1 of 1) PTHR24031:SF306 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 11; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTACCGTTCCGTTGCGCCCAGCTGTTGCTGCCATTGCGTCCGGTGATG
Internal bar code:CATATCGCTCAAAAGTGGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3808
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAACCCGTCAACGTCAC
Suggested primer 2:GGGCAGGTCCATGTTGATGA