Insertion junction: CLIP2.017275_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017275
Chromosome:chromosome 5
Location:496617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244150 (1 of 1) IPR002073//IPR020683 - 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGGGTGACCAGAGGTGTGCAGGCTAGACACATACTTGCTAGTAGCG
Internal bar code:ACCCCCGTTAATCCGGACATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:875
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAACATGGAAGCCCTACT
Suggested primer 2:CTCCTCCTCTGCCTTCTCCT