Insertion junction: CLIP2.017278_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017278
Chromosome:chromosome 9
Location:5611479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCGTCGGCTTCTGGCGCGGGCCGGGAGGAGGCCACACACGCCGGCA
Internal bar code:ACCCCCCTGCAATCCTCGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGCAACAATGACCGCCT
Suggested primer 2:TTTGCACATCCACTTTGCCG