Insertion junction: CLIP2.017278_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017278
Chromosome:chromosome 9
Location:5611796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCCGAGCCAAAGTTGTAGGCCGAGAAAACCATGTCCTGTTGATGTA
Internal bar code:ACCCCCCTGCAATCCTCGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCACATCCACTTTGCCG
Suggested primer 2:TACAGCAACAATGACCGCCT