Insertion junction: CLIP2.017289_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017289
Chromosome:chromosome 10
Location:6749537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g467100 (1 of 1) PTHR31633//PTHR31633:SF1 - FAMILY NOT NAMED // H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAAGTATGCCACCACATGACAGCAGGTGAAGGCGCGCAGCCCGGCCA
Internal bar code:GGATCAAGGATATGTAAGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3545
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AGACAAGGTTGGTCGCTCTG
Suggested primer 2:TACCAAGCATGCCCCTGAAG