Insertion junction: CLIP2.017298_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017298
Chromosome:chromosome 8
Location:2778837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373583 OXA2,ALB3D (1 of 1) IPR000104//IPR001708//IPR013026//IPR019734 - Antifreeze protein, type I // Membrane insertase OXA1/ALB3/YidC // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; ALBINO3-like translocon protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCAGGCCGAATGGTCGCCCGTGGGGTTACAGGCTTATCGCGGGTAAG
Internal bar code:TGTAGACGATCGTTGTCAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2468
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGTGTGTGT
Suggested primer 2:ACCAGCCCAAACTGAACCAA