Insertion junction: CLIP2.017313_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017313
Chromosome:chromosome 9
Location:4640794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401812 (1 of 1) PF00580//PF13086//PF13087 - UvrD/REP helicase N-terminal domain (UvrD-helicase) // AAA domain (AAA_11) // AAA domain (AAA_12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATAAATGGGTAGGAGTAGGGGCGGCGGCGTTGGCAACCAGCGGTGG
Internal bar code:GCCCTCCGGTCCTACGTGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2615
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACAGGCACACACATG
Suggested primer 2:TGTTCGTCTGTGTAGGTGGC