Insertion junction: CLIP2.017318_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017318
Chromosome:chromosome 10
Location:3470108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444600 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGTTGGCCGGTTCTCAACGGCAGGCGCCTCGCTCCTTCTCACGCCTT
Internal bar code:CTTTGTGGCGATTTCGATGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCCACTCCTCGAACTA
Suggested primer 2:ATACAGCAGCGTTATCGGGG