Insertion junction: CLIP2.017341_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017341
Chromosome:chromosome 16
Location:4261561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g669500 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAGAGGAGGCGCACTAGGGCGGGCCTTGCATGAATGCAAAGCGTAGA
Internal bar code:GATGCGCAAACTCCAATTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGGACGCAATCGGTAT
Suggested primer 2:CAATGTTTGCTCAGGTGGGC