Insertion junction: CLIP2.017354_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017354
Chromosome:chromosome 12
Location:8246941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551550 (1 of 1) PF00098//PF02689//PF05970//PF13604 - Zinc knuckle (zf-CCHC) // Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // AAA domain (AAA_30) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGAAGAAGGACACGCGCCAGCGCATACGGGGCTACGAAGTGCTTAT
Internal bar code:TCTGGTTGGCGTCGGTAGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACCTCCAGAACCTGAG
Suggested primer 2:TCTTCTTCACAGGGAACGCC