Insertion junction: CLIP2.017359_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017359
Chromosome:chromosome 7
Location:6390517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357550 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTGCGGCACTGCCGCGGGCGATGCGTAAACTTGGATGAACCTTACC
Internal bar code:GAGTAGAAGTCCCTGTTTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGGTTCCATTCCATGA
Suggested primer 2:TGTCCGACATCAAGGTGTGG