Insertion junction: CLIP2.017360_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017360
Chromosome:chromosome 6
Location:8419599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308200 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCATGACACTGCAGGCAACGCGTTCACGTGCACGGTCGTTGTGAAGAA
Internal bar code:ACTCGAGTCAGTGACTGGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2194
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAGCGTGCTTTGTTTCA
Suggested primer 2:TACGACAGCGGTTTCGTTGA