Insertion junction: CLIP2.017362_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017362
Chromosome:chromosome 1
Location:3336329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021550 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCACGCCCTCATCGGCCATGAGCAGCCCGCGCCACGACTCGGCCCTTG
Internal bar code:AGGATGGGCGAAAGCGTCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTGTGATGTTTGCAGTT
Suggested primer 2:AGCCACATCACCTCAATGGG