Insertion junction: CLIP2.017366_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017366
Chromosome:chromosome 13
Location:2665449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGAAGTGGAGGTGATGTCGGAAGTGAAGTCACCGAAGTCGTCATCGG
Internal bar code:GTTTAACACAAGAATGCGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1425
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTGCCTTGGATGTTTT
Suggested primer 2:AGCCCAAGAACTTCCTGCTC