Insertion junction: CLIP2.017371_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017371
Chromosome:chromosome 3
Location:6527088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194100 MAPKKK3 (1 of 1) PF14381 - Ethylene-responsive protein kinase Le-CTR1 (EDR1); Mitogen-Activated Protein Kinase Kinase Kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGCGGCAACCCACGCCTGCGCCGCCCAGGGGTGCAGCGCGGTGCCGG
Internal bar code:GTGCCAGCCCACGTATGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4466
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCCTTCACCAACGTCCC
Suggested primer 2:TATTGTCATCTCGTGCGCGA