Insertion junction: CLIP2.017382_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017382
Chromosome:chromosome 7
Location:2499975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329550 VFL5 Variable flagella protein 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAAGCCTCAGCCGGCAGGACGCCGGGCAGTACCGCGCCTGCACCCCG
Internal bar code:AAGTTTTATTGTGGTCATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3155
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACACCAGTACGACCAG
Suggested primer 2:ATGCGCCTGTCCAATACACA