Insertion junction: CLIP2.017386_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017386
Chromosome:chromosome 16
Location:4707528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667100 LMR3 (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein with LysM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAGCTGCACAGCGGGCTTGTCCCCCGACCGGACCGCCGTCGCCTTTC
Internal bar code:AACCTTTATTATCAAGCGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:943
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGTCCTACGGATGGATG
Suggested primer 2:GTCACGTTTTGGCCCAAGTC