Insertion junction: CLIP2.017402_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017402
Chromosome:chromosome 3
Location:917159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146587 (1 of 3) PTHR24193//PTHR24193:SF87 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCTGTCCAGGCTACAGGCGCCTGCCGCGATCCCTGCCAGCACAGCCA
Internal bar code:ACGCAGACTTCCGATCTTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1994
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTACCGACACCTATGAC
Suggested primer 2:CACTTGAACCACGCCCAAAG