Insertion junction: CLIP2.017404_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017404
Chromosome:chromosome 1
Location:2350281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013250 (1 of 2) IPR006357//IPR023214 - HAD-superfamily hydrolase, subfamily IIA // HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTCGTCCCAGTGCGGGTTGTTGTCCCTGTCCGTGTGCGGCTGTCGG
Internal bar code:GACACGAGAAAGATACGGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4649
LEAP-Seq percent confirming:50.5376
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCGAATACCGAGCGTCG
Suggested primer 2:TATGGCATCCGCGCAAATTG