Insertion junction: CLIP2.017410_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017410
Chromosome:chromosome 3
Location:1035681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148201 (1 of 10) IPR013781 - Glycoside hydrolase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTCCCGCAGCTCCGCCTCGCTGTGGTTCAGCCGCCCCAACGCCGCCG
Internal bar code:GTCTGAAGTGCCGTTTGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCAGCACTTGAAGACTA
Suggested primer 2:TGAGCACTTGGGATCCACAC