Insertion junction: CLIP2.017410_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017410
Chromosome:chromosome 3
Location:1035683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148201 (1 of 10) IPR013781 - Glycoside hydrolase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTGCGGTGCGGGGGGTGGGGGGCGGGAGGAGCGCAGCAGGCTGAGT
Internal bar code:GTCTGAAGTGCCGTTTGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1600
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCACTTGGGATCCACAC
Suggested primer 2:CCGCCAGCACTTGAAGACTA