Insertion junction: CLIP2.017414_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017414
Chromosome:chromosome 7
Location:945373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319150 PTP4 Protein tyrosine phosphatase; (1 of 2) PTHR10367 - MRNA-CAPPING ENZYME intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATTAAGAACACGCACCAAAACACATCTGTCTAATCACTGTCCTGCGCG
Internal bar code:TAGTTTAAGTCCTTTTCCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGAGGACCTGACCAG
Suggested primer 2:ATCAGGTAGCAGCACACCAC