Insertion junction: CLIP2.017422_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017422
Chromosome:chromosome 1
Location:6278862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044600 (1 of 2) PF17047 - Synaptotagmin-like mitochondrial-lipid-binding domain (SMP_LBD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCAGCATGGGCGGCATGAACAGCGGTAGCGCCAGCAGCGGCAGCGC
Internal bar code:TAAACCTCATTTGAATGAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:757
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGGCCATCTCTACTACC
Suggested primer 2:CGCTAACCTGTACGCAATGC