Insertion junction: CLIP2.017426_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017426
Chromosome:chromosome 11
Location:4143135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481313 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCGCCGCTGCGGTCTCTGCTGCCGCGGTGCGGGCGGGTGGAGCTGCA
Internal bar code:TGTAGCACTTGGGATAAATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1569
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCCACAGTACTCCAG
Suggested primer 2:ATCTTCAGCACCATCGCCAA