Insertion junction: CLIP2.017443_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017443
Chromosome:chromosome 17
Location:1435931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706400 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACACCCGTGGACCAAGCATCCCGCTTCCTGCTGCGAGGAGTACGCA
Internal bar code:TGGAGAGTTGGGATGTCTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAACGCTAAGTTCGCT
Suggested primer 2:ATCTGCACCTGATACTGCGG