Insertion junction: CLIP2.017485_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017485
Chromosome:chromosome 13
Location:4043561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590650 (1 of 1) PF07223 - Protein of unknown function (DUF1421) (DUF1421) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATTCTGTGCATGCAGATGCCGCCGCCAGGGGTTCCGGACCAGGGGCAC
Internal bar code:TTGGGCGAACCTACATATAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGCGCTAACAAGCCGTA
Suggested primer 2:TTGGACACGGCGTTTAAGGA