Insertion junction: CLIP2.017488_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017488
Chromosome:chromosome 10
Location:5213990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455950 FAP407 Flagellar Associated Protein 407; (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGTCCGAGAGAGCTTGAACAGAAGGAGCAGGACTTTGCACATGCTGA
Internal bar code:GGGGGCCCCCGCAATAGACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:946
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCCAAAGCTCTGTGGCT
Suggested primer 2:AGAAGCTAGCCCGCGAATAC