Insertion junction: CLIP2.017490_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017490
Chromosome:chromosome 2
Location:6955803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389245 (1 of 1) PTHR24078//PTHR24078:SF205 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGAGGGCGTGTGGCGGGTGGGGCCCTGGGCTGGCGAGAGAGGGAAGTA
Internal bar code:ATTATATCGATAACTTATCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTCCTTCTTCCCGACCG
Suggested primer 2:CTCTGCGCACGCTATTGTTC