Insertion junction: CLIP2.017490_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017490
Chromosome:chromosome 2
Location:6955804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389245 (1 of 1) PTHR24078//PTHR24078:SF205 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTTTCCGCCGGCGCCGTCTCCTCCCAACCAAGCCTTACGGCACCCAC
Internal bar code:TCGTGCGCAGTAGGGAGGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4789
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCGCACGCTATTGTTC
Suggested primer 2:GTTCTCCTTCTTCCCGACCG