Insertion junction: CLIP2.017496_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017496
Chromosome:chromosome 6
Location:7903953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304000 SRH14 (1 of 1) PTHR10799:SF580 - INTEGRATOR COMPLEX SUBUNIT 10-LIKE PROTEIN; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACGCGTCGCGCACTCATCGCTTGTTGTGTTCTGGCTCTCGCAGCC
Internal bar code:TACTATCGGGAATTTAATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:986
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGATAGGTATGGCGCCA
Suggested primer 2:GCTGCTGTGCTATGACATGC