Insertion junction: CLIP2.017497_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017497
Chromosome:chromosome 1
Location:4347711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029500 CDPKK3 Calcium/calmodulin-dependent protein kinase kinase; (1 of 1) PTHR24347//PTHR24347:SF249 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGCAGGAGTAAAGAACGGAGCAGAGGGAAGGAGAAGGAGCGGTGAGG
Internal bar code:CGCTAGACGCTGGACCGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2145
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCAACCTGCGCTCCAAGA
Suggested primer 2:TCCGACCGAAAAACCCACAT