Insertion junction: CLIP2.017498_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017498
Chromosome:chromosome 17
Location:4783775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g733250 FKB16D,FKB16-4,FKB7 (1 of 1) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC; peptidyl-prolyl cis-trans isomerase, FKBP-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCTCAGGCTGAGCTGCTCGAGTGCATGGCTGGACATTAGGCAGGCA
Internal bar code:CCGTGTATTTGGTGCTAATCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1701
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACACCTCACAGCCGTAC
Suggested primer 2:CATCATTTCTCACGCCTGCG