Insertion junction: CLIP2.017500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017500
Chromosome:chromosome 3
Location:6181276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191200 RME3 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS); RNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTCTGTAAGGCTGGGCGCGTGGGGCTGTCTGCCGTGGAAGCTAGCAG
Internal bar code:TTTGATGCGACAGGGTCGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGAACATGTTAGCGCG
Suggested primer 2:TCAACATCGTCACGCTCACA