Insertion junction: CLIP2.017504_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017504
Chromosome:chromosome 17
Location:189512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697150 (1 of 1) IPR000104//IPR003594//IPR024975 - Antifreeze protein, type I // Histidine kinase-like ATPase, C-terminal domain // Domain of unknown function DUF3883 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGAGAGCCGTCCACCCGCGTCCTGGACCCGACCCCAAACCCCTGAAC
Internal bar code:GGCTGGATGATGTACCCCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCAGCACAATGTCATC
Suggested primer 2:GTGATTTTGGGAGTTCGGCG