Insertion junction: CLIP2.017506_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017506
Chromosome:chromosome 14
Location:2089126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801627 (1 of 1) PTHR10438//PTHR10438:SF255//PTHR10438:SF256 - THIOREDOXIN // THIOREDOXIN M4, CHLOROPLASTIC // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCGACGTTTACCAGGCCAGTTGAAAAACGAGCTGGCGCGAATGAACT
Internal bar code:GTAGGAGTTGCTCGTGTGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3595
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTATTGAGCGCTCGGAGG
Suggested primer 2:GACTGCCTTTGGATCCAGCT